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Micro-CT pipeline

Supported Platforms

Linux, Mac OSX, Windows

Supported Data Formats


Data Type


Data Size (compressed)

0 - 500MB

Resource Description

Quantitative analysis of 4D cardiac images needs segmentation of cardiac chambers at each time point, which is very time-consuming if done manually. We show a pipeline for registration-based segmentation and functional analysis of 4D cardiac micro-CT mouse data.


Cardiovascular, Movie, Quantification